Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Gm45331-201ENSMUST00000209868 554 ntBASIC11.55□□□□□ -0.56
Prpf8Q99PV0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Prpf8Q99PV0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Gm37424-201ENSMUST00000191727 561 ntBASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Gm6916-202ENSMUST00000205523 195 ntBASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.54□□□□□ -0.56
Prpf8Q99PV0 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Gm15393-201ENSMUST00000120499 219 ntBASIC11.54□□□□□ -0.56
Prpf8Q99PV0 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.54□□□□□ -0.56
Prpf8Q99PV0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Prpf8Q99PV0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gm8463-201ENSMUST00000208573 613 ntBASIC11.53□□□□□ -0.56
Prpf8Q99PV0 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.53□□□□□ -0.56
Prpf8Q99PV0 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Mir1982-201ENSMUST00000157368 74 ntBASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.53□□□□□ -0.56
Prpf8Q99PV0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms