Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm37042-201ENSMUST00000193816 581 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm25214-201ENSMUST00000104573 129 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm13570-201ENSMUST00000140763 309 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm44069-201ENSMUST00000204898 506 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh15Q99PJ1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Gm8805-201ENSMUST00000117848 313 ntBASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Mir7032-201ENSMUST00000185154 79 ntBASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Gm18584-201ENSMUST00000203098 964 ntBASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdh15Q99PJ1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Gm10434-201ENSMUST00000101158 471 ntBASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Gm14726-201ENSMUST00000120623 896 ntBASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Gm14017-201ENSMUST00000121934 386 ntBASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Gm26185-201ENSMUST00000157692 266 ntBASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Gm19163-201ENSMUST00000223313 780 ntBASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh15Q99PJ1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh15Q99PJ1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms