Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cdk5rap3Q99LM2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Cdk5rap3Q99LM2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap3Q99LM2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Cdk5rap3Q99LM2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap3Q99LM2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap3Q99LM2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap3Q99LM2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdk5rap3Q99LM2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Gm2810-201ENSMUST00000118681 990 ntBASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Gm27741-201ENSMUST00000185060 237 ntBASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdk5rap3Q99LM2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms