Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RtcbQ99LF4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RtcbQ99LF4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Mir698-201ENSMUST00000102164 109 ntBASIC17.26■□□□□ 0.35
RtcbQ99LF4 Gm22018-201ENSMUST00000104357 131 ntBASIC17.26■□□□□ 0.35
RtcbQ99LF4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Gm12203-201ENSMUST00000118235 598 ntBASIC17.26■□□□□ 0.35
RtcbQ99LF4 Gm12209-201ENSMUST00000120089 596 ntBASIC17.26■□□□□ 0.35
RtcbQ99LF4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Gm27682-201ENSMUST00000183930 110 ntBASIC17.26■□□□□ 0.35
RtcbQ99LF4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RtcbQ99LF4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.25■□□□□ 0.35
RtcbQ99LF4 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.25■□□□□ 0.35
RtcbQ99LF4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Gm15236-201ENSMUST00000117309 379 ntBASIC17.25■□□□□ 0.35
RtcbQ99LF4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RtcbQ99LF4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Gm4271-201ENSMUST00000174444 973 ntBASIC17.25■□□□□ 0.35
RtcbQ99LF4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Gm7783-201ENSMUST00000204795 781 ntBASIC17.25■□□□□ 0.35
RtcbQ99LF4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.25■□□□□ 0.35
RtcbQ99LF4 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.25■□□□□ 0.35
RtcbQ99LF4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Gm24526-201ENSMUST00000082921 158 ntBASIC17.25■□□□□ 0.35
RtcbQ99LF4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RtcbQ99LF4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm5687-201ENSMUST00000118252 640 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm29741-201ENSMUST00000192667 421 ntBASIC17.24■□□□□ 0.35
RtcbQ99LF4 Gm4857-201ENSMUST00000192718 785 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms