Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Gm7561-201ENSMUST00000211203 886 ntBASIC14.05□□□□□ -0.16
Cstf1Q99LC2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.05□□□□□ -0.16
Cstf1Q99LC2 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Gm6091-201ENSMUST00000098307 165 ntBASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf1Q99LC2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Gm29649-201ENSMUST00000185649 419 ntBASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cstf1Q99LC2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Gm15429-201ENSMUST00000151268 798 ntBASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Mir3102-201ENSMUST00000175555 104 ntBASIC14.03□□□□□ -0.16
Cstf1Q99LC2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.03□□□□□ -0.16
Cstf1Q99LC2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Gm2495-201ENSMUST00000191160 466 ntBASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Gm7287-201ENSMUST00000205267 602 ntBASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cstf1Q99LC2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms