Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhga11Q91XY8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Gm2810-201ENSMUST00000118681 990 ntBASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Gm12882-201ENSMUST00000121696 517 ntBASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga11Q91XY8 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Gm38225-201ENSMUST00000194001 393 ntBASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga11Q91XY8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga11Q91XY8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms