Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp33Q8R5K2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp33Q8R5K2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp33Q8R5K2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Gm17420-201ENSMUST00000164753 153 ntBASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Gm2495-201ENSMUST00000191160 466 ntBASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Gm37714-201ENSMUST00000194742 342 ntBASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Gm18905-201ENSMUST00000205454 928 ntBASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Usp33Q8R5K2 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Gm8652-201ENSMUST00000181363 964 ntBASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Gm45784-201ENSMUST00000188360 142 ntBASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Gm43094-201ENSMUST00000196549 921 ntBASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Gm10478-201ENSMUST00000084451 396 ntBASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp33Q8R5K2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Gm42693-201ENSMUST00000196779 631 ntBASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Olfr582-201ENSMUST00000098212 960 ntBASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp33Q8R5K2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms