Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Mir1897-201ENSMUST00000122581 272 ntBASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Top1mtQ8R4U6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Gm27533-201ENSMUST00000183800 152 ntBASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Gm6916-202ENSMUST00000205523 195 ntBASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Shd-206ENSMUST00000225145 998 ntBASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Top1mtQ8R4U6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Top1mtQ8R4U6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Top1mtQ8R4U6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Top1mtQ8R4U6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Top1mtQ8R4U6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Top1mtQ8R4U6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Gm27430-201ENSMUST00000184585 107 ntBASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Gm44333-201ENSMUST00000197168 107 ntBASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Top1mtQ8R4U6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms