Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc58Q8R3Q6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Gm7230-201ENSMUST00000173026 815 ntBASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Mir7071-201ENSMUST00000184847 69 ntBASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Gm9182-201ENSMUST00000217829 639 ntBASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc58Q8R3Q6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc58Q8R3Q6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm2272-201ENSMUST00000194903 582 ntBASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm45167-201ENSMUST00000208007 322 ntBASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc58Q8R3Q6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms