Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gm45668-201ENSMUST00000211271 493 ntBASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Zcchc9Q8R1J3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zcchc9Q8R1J3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Gm25857-201ENSMUST00000082788 129 ntBASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zcchc9Q8R1J3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Zcchc9Q8R1J3 Gm21854-201ENSMUST00000179901 471 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms