Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lin28aQ8K3Y3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.17□□□□□ -0.3
Lin28aQ8K3Y3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lin28aQ8K3Y3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lin28aQ8K3Y3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lin28aQ8K3Y3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lin28aQ8K3Y3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Gm15393-201ENSMUST00000120499 219 ntBASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Gm24694-201ENSMUST00000180054 110 ntBASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Gm27663-201ENSMUST00000184839 110 ntBASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lin28aQ8K3Y3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lin28aQ8K3Y3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Lin28aQ8K3Y3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lin28aQ8K3Y3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lin28aQ8K3Y3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lin28aQ8K3Y3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.13□□□□□ -0.31
Lin28aQ8K3Y3 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.13□□□□□ -0.31
Lin28aQ8K3Y3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lin28aQ8K3Y3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lin28aQ8K3Y3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms