Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clip4Q8CI96 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.22□□□□□ -0.13
Clip4Q8CI96 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.22□□□□□ -0.13
Clip4Q8CI96 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gm13464-201ENSMUST00000119418 935 ntBASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gm10253-201ENSMUST00000194270 940 ntBASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gm7774-201ENSMUST00000200064 533 ntBASIC14.22□□□□□ -0.13
Clip4Q8CI96 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.22□□□□□ -0.13
Clip4Q8CI96 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clip4Q8CI96 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.21□□□□□ -0.13
Clip4Q8CI96 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Gm25948-201ENSMUST00000175334 112 ntBASIC14.21□□□□□ -0.13
Clip4Q8CI96 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.21□□□□□ -0.13
Clip4Q8CI96 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clip4Q8CI96 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clip4Q8CI96 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clip4Q8CI96 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Clip4Q8CI96 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clip4Q8CI96 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Clip4Q8CI96 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Clip4Q8CI96 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.2□□□□□ -0.14
Clip4Q8CI96 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.2□□□□□ -0.14
Clip4Q8CI96 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.2□□□□□ -0.14
Clip4Q8CI96 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.2□□□□□ -0.14
Clip4Q8CI96 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clip4Q8CI96 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms