Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.66■□□□□ 0.1
Ccdc38Q8CDN8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Gm25287-201ENSMUST00000103846 110 ntBASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Gm22918-201ENSMUST00000103855 110 ntBASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Gm43514-201ENSMUST00000198852 424 ntBASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.65■□□□□ 0.1
Ccdc38Q8CDN8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ccdc38Q8CDN8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Gm13823-201ENSMUST00000119930 345 ntBASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Gm6222-201ENSMUST00000120787 396 ntBASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 AA619741-201ENSMUST00000195095 646 ntBASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Gm18049-201ENSMUST00000208909 581 ntBASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc38Q8CDN8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Mir6990-201ENSMUST00000183724 91 ntBASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ccdc38Q8CDN8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms