Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.26□□□□□ -0.29
Ska3Q8C263 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.26□□□□□ -0.29
Ska3Q8C263 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.26□□□□□ -0.29
Ska3Q8C263 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ska3Q8C263 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ska3Q8C263 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ska3Q8C263 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ska3Q8C263 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ska3Q8C263 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Gm13453-201ENSMUST00000118708 357 ntBASIC13.25□□□□□ -0.29
Ska3Q8C263 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.25□□□□□ -0.29
Ska3Q8C263 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.25□□□□□ -0.29
Ska3Q8C263 Shd-206ENSMUST00000225145 998 ntBASIC13.25□□□□□ -0.29
Ska3Q8C263 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.25□□□□□ -0.29
Ska3Q8C263 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ska3Q8C263 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ska3Q8C263 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ska3Q8C263 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ska3Q8C263 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ska3Q8C263 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.25□□□□□ -0.29
Ska3Q8C263 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ska3Q8C263 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ska3Q8C263 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ska3Q8C263 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.24□□□□□ -0.29
Ska3Q8C263 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Gm27680-201ENSMUST00000184192 160 ntBASIC13.24□□□□□ -0.29
Ska3Q8C263 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.24□□□□□ -0.29
Ska3Q8C263 Gm17837-201ENSMUST00000186435 985 ntBASIC13.24□□□□□ -0.29
Ska3Q8C263 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.24□□□□□ -0.29
Ska3Q8C263 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ska3Q8C263 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.24□□□□□ -0.29
Ska3Q8C263 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Ska3Q8C263 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ska3Q8C263 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.24□□□□□ -0.29
Ska3Q8C263 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms