Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc116Q80X53 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm22065-201ENSMUST00000103753 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm22066-201ENSMUST00000103761 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm24932-201ENSMUST00000103763 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm24115-201ENSMUST00000103799 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm22190-201ENSMUST00000103827 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm22191-201ENSMUST00000103831 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm24721-201ENSMUST00000103849 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm28018-201ENSMUST00000103869 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm26399-201ENSMUST00000103937 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm25349-201ENSMUST00000177728 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm23616-201ENSMUST00000177797 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm25871-201ENSMUST00000177816 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm24752-201ENSMUST00000178240 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm24496-201ENSMUST00000178287 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm25649-201ENSMUST00000178476 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm25548-201ENSMUST00000178681 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm23147-201ENSMUST00000178841 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm26095-201ENSMUST00000179270 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm22171-201ENSMUST00000179283 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm23936-201ENSMUST00000179354 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm22619-201ENSMUST00000179516 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm25255-201ENSMUST00000179579 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm24755-201ENSMUST00000179691 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm26506-201ENSMUST00000179692 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm25086-201ENSMUST00000179931 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm23243-201ENSMUST00000180047 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm24659-201ENSMUST00000180212 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm24169-201ENSMUST00000180244 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm23689-201ENSMUST00000180354 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm27359-201ENSMUST00000184153 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm27785-201ENSMUST00000184268 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm27466-201ENSMUST00000184396 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm27703-201ENSMUST00000184836 110 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm44608-201ENSMUST00000206827 855 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Chchd1-203ENSMUST00000224633 557 ntBASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc116Q80X53 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc116Q80X53 Gm12428-201ENSMUST00000119844 727 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms