Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.02□□□□□ -0.32
Pif1Q80SX8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pif1Q80SX8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.02□□□□□ -0.33
Pif1Q80SX8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.02□□□□□ -0.33
Pif1Q80SX8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.02□□□□□ -0.33
Pif1Q80SX8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.02□□□□□ -0.33
Pif1Q80SX8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Gm13829-201ENSMUST00000119600 138 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Gm15806-201ENSMUST00000120696 955 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Gm18062-201ENSMUST00000208020 547 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Gm18055-201ENSMUST00000208254 547 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.01□□□□□ -0.33
Pif1Q80SX8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pif1Q80SX8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pif1Q80SX8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13□□□□□ -0.33
Pif1Q80SX8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pif1Q80SX8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pif1Q80SX8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13□□□□□ -0.33
Pif1Q80SX8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pif1Q80SX8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13□□□□□ -0.33
Pif1Q80SX8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms