Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.47□□□□□ -0.57
Vma21Q78T54 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vma21Q78T54 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vma21Q78T54 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Vma21Q78T54 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.46□□□□□ -0.57
Vma21Q78T54 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Vma21Q78T54 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.46□□□□□ -0.57
Vma21Q78T54 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.46□□□□□ -0.57
Vma21Q78T54 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.46□□□□□ -0.57
Vma21Q78T54 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.46□□□□□ -0.57
Vma21Q78T54 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vma21Q78T54 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vma21Q78T54 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Vma21Q78T54 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vma21Q78T54 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Vma21Q78T54 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vma21Q78T54 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vma21Q78T54 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Vma21Q78T54 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vma21Q78T54 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.45□□□□□ -0.58
Vma21Q78T54 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Vma21Q78T54 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Vma21Q78T54 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.45□□□□□ -0.58
Vma21Q78T54 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.45□□□□□ -0.58
Vma21Q78T54 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.45□□□□□ -0.58
Vma21Q78T54 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.45□□□□□ -0.58
Vma21Q78T54 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.45□□□□□ -0.58
Vma21Q78T54 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Vma21Q78T54 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Vma21Q78T54 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.44□□□□□ -0.58
Vma21Q78T54 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Vma21Q78T54 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.44□□□□□ -0.58
Vma21Q78T54 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms