Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Mre11Q61216 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Mre11Q61216 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Mre11Q61216 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.88■□□□□ 0.29
Mre11Q61216 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Mre11Q61216 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Mre11Q61216 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Mre11Q61216 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Mre11Q61216 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.88■□□□□ 0.29
Mre11Q61216 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Mre11Q61216 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Mre11Q61216 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Mre11Q61216 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Mre11Q61216 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Mre11Q61216 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.87■□□□□ 0.29
Mre11Q61216 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.87■□□□□ 0.29
Mre11Q61216 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.87■□□□□ 0.29
Mre11Q61216 Gm9182-201ENSMUST00000217829 639 ntBASIC16.87■□□□□ 0.29
Mre11Q61216 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.87■□□□□ 0.29
Mre11Q61216 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Mre11Q61216 Gm42480-201ENSMUST00000198434 2595 ntBASIC16.87■□□□□ 0.29
Mre11Q61216 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Mre11Q61216 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Mre11Q61216 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.87■□□□□ 0.29
Mre11Q61216 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Mre11Q61216 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Mre11Q61216 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Gm10819-201ENSMUST00000099988 561 ntBASIC16.86■□□□□ 0.29
Mre11Q61216 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.86■□□□□ 0.29
Mre11Q61216 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Mre11Q61216 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Mre11Q61216 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.86■□□□□ 0.29
Mre11Q61216 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Mre11Q61216 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.85■□□□□ 0.29
Mre11Q61216 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Mre11Q61216 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Mre11Q61216 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.85■□□□□ 0.29
Mre11Q61216 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.85■□□□□ 0.29
Mre11Q61216 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.85■□□□□ 0.29
Mre11Q61216 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mre11Q61216 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms