Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ClpbQ60649 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.53□□□□□ -0.24
ClpbQ60649 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ClpbQ60649 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.53□□□□□ -0.24
ClpbQ60649 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ClpbQ60649 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ClpbQ60649 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.53□□□□□ -0.24
ClpbQ60649 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ClpbQ60649 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClpbQ60649 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
ClpbQ60649 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClpbQ60649 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ClpbQ60649 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
ClpbQ60649 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Gm13823-201ENSMUST00000119930 345 ntBASIC13.52□□□□□ -0.25
ClpbQ60649 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.52□□□□□ -0.25
ClpbQ60649 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.52□□□□□ -0.25
ClpbQ60649 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
ClpbQ60649 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Gm17837-201ENSMUST00000186435 985 ntBASIC13.52□□□□□ -0.25
ClpbQ60649 Gm7063-201ENSMUST00000186840 981 ntBASIC13.52□□□□□ -0.25
ClpbQ60649 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ClpbQ60649 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ClpbQ60649 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.52□□□□□ -0.25
ClpbQ60649 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ClpbQ60649 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ClpbQ60649 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
ClpbQ60649 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ClpbQ60649 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.51□□□□□ -0.25
ClpbQ60649 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.51□□□□□ -0.25
ClpbQ60649 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ClpbQ60649 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.51□□□□□ -0.25
ClpbQ60649 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
ClpbQ60649 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.51□□□□□ -0.25
ClpbQ60649 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.51□□□□□ -0.25
ClpbQ60649 Gm9719-201ENSMUST00000162765 543 ntBASIC13.51□□□□□ -0.25
ClpbQ60649 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Gm27618-201ENSMUST00000183671 60 ntBASIC13.51□□□□□ -0.25
ClpbQ60649 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.51□□□□□ -0.25
ClpbQ60649 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.51□□□□□ -0.25
ClpbQ60649 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ClpbQ60649 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ClpbQ60649 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
ClpbQ60649 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms