Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shroom1Q5SX79 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.98□□□□□ -0.01
Shroom1Q5SX79 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Gm19220-201ENSMUST00000222682 803 ntBASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Shroom1Q5SX79 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Gm18187-201ENSMUST00000196476 984 ntBASIC14.97□□□□□ -0.01
Shroom1Q5SX79 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Gm18624-201ENSMUST00000220966 658 ntBASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Shroom1Q5SX79 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Shroom1Q5SX79 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms