Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps13aQ5H8C4 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Gm11222-201ENSMUST00000119005 738 ntBASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps13aQ5H8C4 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.65□□□□□ -0.23
Vps13aQ5H8C4 Gm9550-201ENSMUST00000161130 862 ntBASIC13.65□□□□□ -0.23
Vps13aQ5H8C4 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.65□□□□□ -0.23
Vps13aQ5H8C4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Vps13aQ5H8C4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Vps13aQ5H8C4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm29608-201ENSMUST00000190444 463 ntBASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm11667-201ENSMUST00000119828 486 ntBASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm3890-201ENSMUST00000182416 207 ntBASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps13aQ5H8C4 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Gm10268-201ENSMUST00000085340 555 ntBASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps13aQ5H8C4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms