Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdkl5Q3UTQ8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Gm15653-201ENSMUST00000119247 907 ntBASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Gm25948-201ENSMUST00000175334 112 ntBASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Gm27622-201ENSMUST00000183779 60 ntBASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.32■□□□□ 0.2
Cdkl5Q3UTQ8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl5Q3UTQ8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl5Q3UTQ8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl5Q3UTQ8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms