Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Gm13464-201ENSMUST00000119418 935 ntBASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Gm6218-201ENSMUST00000219812 628 ntBASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Khdc4Q3TCX3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm8749-201ENSMUST00000117737 331 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm29310-201ENSMUST00000185468 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21825-201ENSMUST00000185728 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm29109-201ENSMUST00000185895 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21896-201ENSMUST00000186520 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21873-201ENSMUST00000186728 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21794-201ENSMUST00000187056 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21880-201ENSMUST00000187275 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21826-201ENSMUST00000187451 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21198-201ENSMUST00000188393 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21749-201ENSMUST00000189343 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21901-201ENSMUST00000189568 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm29424-201ENSMUST00000189716 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm28599-201ENSMUST00000189838 694 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21867-201ENSMUST00000189917 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm29269-201ENSMUST00000190087 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21722-201ENSMUST00000190153 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm28423-201ENSMUST00000190701 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21899-201ENSMUST00000190745 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21910-201ENSMUST00000191163 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21849-201ENSMUST00000191571 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm28678-201ENSMUST00000191593 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm20910-201ENSMUST00000193268 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm21871-201ENSMUST00000194621 696 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.4□□□□□ -0.26
Khdc4Q3TCX3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Khdc4Q3TCX3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
Khdc4Q3TCX3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Khdc4Q3TCX3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Khdc4Q3TCX3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms