Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.48□□□□□ -0.41
Rab42Q0PD08 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rab42Q0PD08 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab42Q0PD08 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.48□□□□□ -0.41
Rab42Q0PD08 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rab42Q0PD08 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rab42Q0PD08 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.47□□□□□ -0.41
Rab42Q0PD08 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.47□□□□□ -0.41
Rab42Q0PD08 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gm43767-201ENSMUST00000198933 381 ntBASIC12.47□□□□□ -0.41
Rab42Q0PD08 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.47□□□□□ -0.41
Rab42Q0PD08 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.47□□□□□ -0.41
Rab42Q0PD08 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rab42Q0PD08 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Mir5131-201ENSMUST00000175426 93 ntBASIC12.46□□□□□ -0.41
Rab42Q0PD08 Mir5126-201ENSMUST00000175513 77 ntBASIC12.46□□□□□ -0.41
Rab42Q0PD08 Gm4899-201ENSMUST00000178708 719 ntBASIC12.46□□□□□ -0.41
Rab42Q0PD08 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.46□□□□□ -0.41
Rab42Q0PD08 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.46□□□□□ -0.41
Rab42Q0PD08 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rab42Q0PD08 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.46□□□□□ -0.42
Rab42Q0PD08 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab42Q0PD08 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab42Q0PD08 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab42Q0PD08 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rab42Q0PD08 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms