Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.72□□□□□ -0.53
Tff1Q08423 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Tff1Q08423 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tff1Q08423 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Tff1Q08423 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Tff1Q08423 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tff1Q08423 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.72□□□□□ -0.53
Tff1Q08423 Gm13365-201ENSMUST00000121188 973 ntBASIC11.72□□□□□ -0.53
Tff1Q08423 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.72□□□□□ -0.53
Tff1Q08423 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Tff1Q08423 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.72□□□□□ -0.53
Tff1Q08423 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.72□□□□□ -0.53
Tff1Q08423 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.72□□□□□ -0.53
Tff1Q08423 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tff1Q08423 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.72□□□□□ -0.53
Tff1Q08423 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.71□□□□□ -0.53
Tff1Q08423 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm15427-201ENSMUST00000117288 531 ntBASIC11.71□□□□□ -0.53
Tff1Q08423 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.71□□□□□ -0.53
Tff1Q08423 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm16026-204ENSMUST00000162652 683 ntBASIC11.71□□□□□ -0.53
Tff1Q08423 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm27301-201ENSMUST00000184012 127 ntBASIC11.71□□□□□ -0.53
Tff1Q08423 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.71□□□□□ -0.53
Tff1Q08423 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tff1Q08423 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tff1Q08423 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Tff1Q08423 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.71□□□□□ -0.54
Tff1Q08423 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tff1Q08423 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms