Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Thbs3Q05895 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Gm12428-201ENSMUST00000119844 727 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 Gm14767-201ENSMUST00000121559 586 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Gm27618-201ENSMUST00000183671 60 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Thbs3Q05895 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.37□□□□□ -0.43
Thbs3Q05895 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Thbs3Q05895 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.37□□□□□ -0.43
Thbs3Q05895 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.36□□□□□ -0.43
Thbs3Q05895 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.36□□□□□ -0.43
Thbs3Q05895 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.36□□□□□ -0.43
Thbs3Q05895 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Gm33320-201ENSMUST00000192232 530 ntBASIC12.36□□□□□ -0.43
Thbs3Q05895 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Gm46209-201ENSMUST00000217912 553 ntBASIC12.36□□□□□ -0.43
Thbs3Q05895 Gm18027-201ENSMUST00000218947 619 ntBASIC12.36□□□□□ -0.43
Thbs3Q05895 Gm9229-201ENSMUST00000222777 126 ntBASIC12.36□□□□□ -0.43
Thbs3Q05895 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.36□□□□□ -0.43
Thbs3Q05895 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Thbs3Q05895 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Thbs3Q05895 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Thbs3Q05895 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms