Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lsm6P62313 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.37□□□□□ -0.43
Lsm6P62313 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Mir125a-201ENSMUST00000083545 68 ntBASIC12.37□□□□□ -0.43
Lsm6P62313 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Lsm6P62313 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lsm6P62313 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm6P62313 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Lsm6P62313 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Lsm6P62313 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Lsm6P62313 Gm27702-201ENSMUST00000184512 56 ntBASIC12.36□□□□□ -0.43
Lsm6P62313 Gm37935-201ENSMUST00000192012 982 ntBASIC12.36□□□□□ -0.43
Lsm6P62313 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm6P62313 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lsm6P62313 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.36□□□□□ -0.43
Lsm6P62313 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm6P62313 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Lsm6P62313 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.36□□□□□ -0.43
Lsm6P62313 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lsm6P62313 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.35□□□□□ -0.43
Lsm6P62313 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.35□□□□□ -0.43
Lsm6P62313 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm6P62313 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms