Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Gm13823-201ENSMUST00000119930 345 ntBASIC14.39□□□□□ -0.11
Tubgcp3P58854 Gm6222-201ENSMUST00000120787 396 ntBASIC14.39□□□□□ -0.11
Tubgcp3P58854 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.39□□□□□ -0.11
Tubgcp3P58854 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.39□□□□□ -0.11
Tubgcp3P58854 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tubgcp3P58854 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Chchd1-203ENSMUST00000224633 557 ntBASIC14.38□□□□□ -0.11
Tubgcp3P58854 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.38□□□□□ -0.11
Tubgcp3P58854 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tubgcp3P58854 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.37□□□□□ -0.11
Tubgcp3P58854 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.37□□□□□ -0.11
Tubgcp3P58854 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tubgcp3P58854 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms