Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx3P50481 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx3P50481 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx3P50481 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lhx3P50481 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Lhx3P50481 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.25□□□□□ -0.13
Lhx3P50481 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lhx3P50481 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lhx3P50481 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.24□□□□□ -0.13
Lhx3P50481 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.24□□□□□ -0.13
Lhx3P50481 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lhx3P50481 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Gm2445-201ENSMUST00000182798 989 ntBASIC14.24□□□□□ -0.13
Lhx3P50481 Gm28760-201ENSMUST00000185995 736 ntBASIC14.24□□□□□ -0.13
Lhx3P50481 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.24□□□□□ -0.13
Lhx3P50481 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.24□□□□□ -0.13
Lhx3P50481 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.24□□□□□ -0.13
Lhx3P50481 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.24□□□□□ -0.13
Lhx3P50481 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lhx3P50481 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lhx3P50481 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lhx3P50481 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lhx3P50481 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Lhx3P50481 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.23□□□□□ -0.13
Lhx3P50481 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.23□□□□□ -0.13
Lhx3P50481 Gm17795-201ENSMUST00000214505 757 ntBASIC14.23□□□□□ -0.13
Lhx3P50481 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lhx3P50481 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Lhx3P50481 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lhx3P50481 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lhx3P50481 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
Lhx3P50481 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Lhx3P50481 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lhx3P50481 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lhx3P50481 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Lhx3P50481 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.22□□□□□ -0.13
Lhx3P50481 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lhx3P50481 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Lhx3P50481 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.22□□□□□ -0.13
Lhx3P50481 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lhx3P50481 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.22□□□□□ -0.13
Lhx3P50481 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms