Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ercc3P49135 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Ercc3P49135 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ercc3P49135 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.71■□□□□ 0.27
Ercc3P49135 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.71■□□□□ 0.27
Ercc3P49135 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.71■□□□□ 0.27
Ercc3P49135 Gm27321-201ENSMUST00000185021 205 ntBASIC16.71■□□□□ 0.27
Ercc3P49135 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ercc3P49135 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.71■□□□□ 0.27
Ercc3P49135 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ercc3P49135 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.71■□□□□ 0.27
Ercc3P49135 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ercc3P49135 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ercc3P49135 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.71■□□□□ 0.26
Ercc3P49135 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ercc3P49135 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ercc3P49135 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ercc3P49135 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.7■□□□□ 0.26
Ercc3P49135 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.7■□□□□ 0.26
Ercc3P49135 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Gm4875-201ENSMUST00000118257 786 ntBASIC16.7■□□□□ 0.26
Ercc3P49135 Gm15957-201ENSMUST00000118893 974 ntBASIC16.7■□□□□ 0.26
Ercc3P49135 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ercc3P49135 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.7■□□□□ 0.26
Ercc3P49135 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.7■□□□□ 0.26
Ercc3P49135 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.7■□□□□ 0.26
Ercc3P49135 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ercc3P49135 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Ercc3P49135 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ercc3P49135 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.7■□□□□ 0.26
Ercc3P49135 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ercc3P49135 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ercc3P49135 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
Ercc3P49135 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.69■□□□□ 0.26
Ercc3P49135 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.69■□□□□ 0.26
Ercc3P49135 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ercc3P49135 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ercc3P49135 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ercc3P49135 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ercc3P49135 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc3P49135 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms