Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Rfx2P48379 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx2P48379 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.78□□□□□ -0.04
Rfx2P48379 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rfx2P48379 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rfx2P48379 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx2P48379 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx2P48379 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfx2P48379 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rfx2P48379 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfx2P48379 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.77□□□□□ -0.05
Rfx2P48379 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx2P48379 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Rfx2P48379 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx2P48379 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx2P48379 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx2P48379 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Rfx2P48379 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx2P48379 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx2P48379 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx2P48379 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfx2P48379 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Rfx2P48379 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfx2P48379 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rfx2P48379 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Rfx2P48379 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rfx2P48379 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Rfx2P48379 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.76□□□□□ -0.05
Rfx2P48379 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfx2P48379 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.76□□□□□ -0.05
Rfx2P48379 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.76□□□□□ -0.05
Rfx2P48379 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.76□□□□□ -0.05
Rfx2P48379 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rfx2P48379 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
Rfx2P48379 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rfx2P48379 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfx2P48379 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Rfx2P48379 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Rfx2P48379 Gm15321-201ENSMUST00000121290 288 ntBASIC14.75□□□□□ -0.05
Rfx2P48379 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.75□□□□□ -0.05
Rfx2P48379 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rfx2P48379 Mir125a-201ENSMUST00000083545 68 ntBASIC14.75□□□□□ -0.05
Rfx2P48379 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.75□□□□□ -0.05
Rfx2P48379 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.75□□□□□ -0.05
Rfx2P48379 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfx2P48379 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rfx2P48379 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.74□□□□□ -0.05
Rfx2P48379 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rfx2P48379 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rfx2P48379 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms