Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chd1P40201 AC096628.2-201ENSMUST00000225443 1413 ntBASIC20.72■□□□□ 0.91
Chd1P40201 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chd1P40201 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC20.72■□□□□ 0.91
Chd1P40201 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Chd1P40201 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Gm11978-201ENSMUST00000122315 466 ntBASIC20.72■□□□□ 0.91
Chd1P40201 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Gm6407-201ENSMUST00000176468 549 ntBASIC20.72■□□□□ 0.91
Chd1P40201 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC20.72■□□□□ 0.91
Chd1P40201 AC161537.1-201ENSMUST00000226199 1015 ntBASIC20.72■□□□□ 0.91
Chd1P40201 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1P40201 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC20.71■□□□□ 0.91
Chd1P40201 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC20.71■□□□□ 0.91
Chd1P40201 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Gm44405-201ENSMUST00000198952 126 ntBASIC20.71■□□□□ 0.91
Chd1P40201 Gm19963-201ENSMUST00000208413 1255 ntBASIC20.71■□□□□ 0.91
Chd1P40201 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1P40201 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Chd1P40201 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Chd1P40201 Gm11667-201ENSMUST00000119828 486 ntBASIC20.7■□□□□ 0.9
Chd1P40201 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Chd1P40201 Gm9550-201ENSMUST00000161130 862 ntBASIC20.7■□□□□ 0.9
Chd1P40201 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC20.7■□□□□ 0.9
Chd1P40201 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Chd1P40201 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC20.7■□□□□ 0.9
Chd1P40201 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 Gm16481-201ENSMUST00000119074 1227 ntBASIC20.7■□□□□ 0.9
Chd1P40201 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1P40201 AC141438.2-201ENSMUST00000215068 271 ntBASIC20.7■□□□□ 0.9
Chd1P40201 AC135114.1-201ENSMUST00000228682 270 ntBASIC20.7■□□□□ 0.9
Chd1P40201 n-R5s77-201ENSMUST00000083757 119 ntBASIC20.7■□□□□ 0.9
Chd1P40201 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Chd1P40201 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC20.69■□□□□ 0.9
Chd1P40201 Crry-ps-201ENSMUST00000079090 1309 ntBASIC20.69■□□□□ 0.9
Chd1P40201 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC20.69■□□□□ 0.9
Chd1P40201 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC20.69■□□□□ 0.9
Chd1P40201 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chd1P40201 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chd1P40201 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chd1P40201 Gm24749-201ENSMUST00000157838 343 ntBASIC20.69■□□□□ 0.9
Chd1P40201 Gm3096-201ENSMUST00000185770 364 ntBASIC20.69■□□□□ 0.9
Chd1P40201 AC140293.1-201ENSMUST00000225626 1247 ntBASIC20.69■□□□□ 0.9
Chd1P40201 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Chd1P40201 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd1P40201 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Gm22121-201ENSMUST00000175148 54 ntBASIC20.68■□□□□ 0.9
Chd1P40201 Gm5597-201ENSMUST00000182353 1193 ntBASIC20.68■□□□□ 0.9
Chd1P40201 Gm45118-201ENSMUST00000208928 825 ntBASIC20.68■□□□□ 0.9
Chd1P40201 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chd1P40201 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC20.68■□□□□ 0.9
Chd1P40201 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Chd1P40201 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chd1P40201 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd1P40201 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms