Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.96□□□□□ -0.33
Sftpa1P35242 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.96□□□□□ -0.33
Sftpa1P35242 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sftpa1P35242 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sftpa1P35242 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sftpa1P35242 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sftpa1P35242 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sftpa1P35242 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sftpa1P35242 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.95□□□□□ -0.34
Sftpa1P35242 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.95□□□□□ -0.34
Sftpa1P35242 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Gm24196-201ENSMUST00000179161 110 ntBASIC12.95□□□□□ -0.34
Sftpa1P35242 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Gm18054-201ENSMUST00000207539 555 ntBASIC12.95□□□□□ -0.34
Sftpa1P35242 Gm18027-201ENSMUST00000218947 619 ntBASIC12.95□□□□□ -0.34
Sftpa1P35242 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sftpa1P35242 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sftpa1P35242 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sftpa1P35242 BC037039-201ENSMUST00000192003 2205 ntBASIC12.94□□□□□ -0.34
Sftpa1P35242 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Gm12384-201ENSMUST00000119228 919 ntBASIC12.94□□□□□ -0.34
Sftpa1P35242 Gm13385-201ENSMUST00000121089 220 ntBASIC12.94□□□□□ -0.34
Sftpa1P35242 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.94□□□□□ -0.34
Sftpa1P35242 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.94□□□□□ -0.34
Sftpa1P35242 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.94□□□□□ -0.34
Sftpa1P35242 Gm24644-201ENSMUST00000157114 139 ntBASIC12.94□□□□□ -0.34
Sftpa1P35242 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.94□□□□□ -0.34
Sftpa1P35242 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.94□□□□□ -0.34
Sftpa1P35242 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sftpa1P35242 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sftpa1P35242 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sftpa1P35242 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sftpa1P35242 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms