Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vcam1P29533 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Vcam1P29533 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Vcam1P29533 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Vcam1P29533 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vcam1P29533 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.09■□□□□ 0.17
Vcam1P29533 Mir1982-201ENSMUST00000157368 74 ntBASIC16.09■□□□□ 0.17
Vcam1P29533 Gm27486-201ENSMUST00000184923 80 ntBASIC16.09■□□□□ 0.17
Vcam1P29533 Gm38223-201ENSMUST00000194484 695 ntBASIC16.09■□□□□ 0.17
Vcam1P29533 Gm44397-201ENSMUST00000195950 113 ntBASIC16.09■□□□□ 0.17
Vcam1P29533 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vcam1P29533 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.09■□□□□ 0.17
Vcam1P29533 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.09■□□□□ 0.17
Vcam1P29533 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vcam1P29533 Gm24447-201ENSMUST00000083977 338 ntBASIC16.09■□□□□ 0.17
Vcam1P29533 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.09■□□□□ 0.17
Vcam1P29533 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vcam1P29533 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Vcam1P29533 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.09■□□□□ 0.17
Vcam1P29533 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Vcam1P29533 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vcam1P29533 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vcam1P29533 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vcam1P29533 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vcam1P29533 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vcam1P29533 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.08■□□□□ 0.17
Vcam1P29533 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vcam1P29533 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vcam1P29533 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.08■□□□□ 0.16
Vcam1P29533 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.08■□□□□ 0.16
Vcam1P29533 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.08■□□□□ 0.16
Vcam1P29533 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.08■□□□□ 0.16
Vcam1P29533 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.08■□□□□ 0.16
Vcam1P29533 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.08■□□□□ 0.16
Vcam1P29533 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vcam1P29533 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Gm10012-201ENSMUST00000078252 192 ntBASIC16.08■□□□□ 0.16
Vcam1P29533 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.08■□□□□ 0.16
Vcam1P29533 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vcam1P29533 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Vcam1P29533 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Gm13612-201ENSMUST00000119276 390 ntBASIC16.07■□□□□ 0.16
Vcam1P29533 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.07■□□□□ 0.16
Vcam1P29533 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.07■□□□□ 0.16
Vcam1P29533 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.07■□□□□ 0.16
Vcam1P29533 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.07■□□□□ 0.16
Vcam1P29533 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Vcam1P29533 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Vcam1P29533 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Vcam1P29533 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Vcam1P29533 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Vcam1P29533 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vcam1P29533 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.07■□□□□ 0.16
Vcam1P29533 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms