Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.99□□□□□ -0.65
Ccl6P27784 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.99□□□□□ -0.65
Ccl6P27784 Gm18737-201ENSMUST00000173594 937 ntBASIC10.99□□□□□ -0.65
Ccl6P27784 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Mir6990-201ENSMUST00000183724 91 ntBASIC10.99□□□□□ -0.65
Ccl6P27784 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.99□□□□□ -0.65
Ccl6P27784 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC10.99□□□□□ -0.65
Ccl6P27784 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Ccl6P27784 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl6P27784 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Ccl6P27784 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl6P27784 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl6P27784 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ccl6P27784 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ccl6P27784 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl6P27784 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl6P27784 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.98□□□□□ -0.65
Ccl6P27784 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Ccl6P27784 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccl6P27784 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ccl6P27784 Gm6736-201ENSMUST00000166583 948 ntBASIC10.98□□□□□ -0.65
Ccl6P27784 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.98□□□□□ -0.65
Ccl6P27784 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.98□□□□□ -0.65
Ccl6P27784 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccl6P27784 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.98□□□□□ -0.65
Ccl6P27784 Gm43474-201ENSMUST00000196415 774 ntBASIC10.98□□□□□ -0.65
Ccl6P27784 Gm43575-201ENSMUST00000196420 516 ntBASIC10.98□□□□□ -0.65
Ccl6P27784 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ccl6P27784 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ccl6P27784 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.98□□□□□ -0.65
Ccl6P27784 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl6P27784 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl6P27784 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl6P27784 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl6P27784 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ccl6P27784 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl6P27784 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl6P27784 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl6P27784 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl6P27784 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.97□□□□□ -0.65
Ccl6P27784 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl6P27784 Gm37935-201ENSMUST00000192012 982 ntBASIC10.97□□□□□ -0.65
Ccl6P27784 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.97□□□□□ -0.65
Ccl6P27784 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms