Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
VimP20152 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VimP20152 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.29□□□□□ -0.12
VimP20152 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VimP20152 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
VimP20152 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
VimP20152 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VimP20152 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VimP20152 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VimP20152 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Gm13836-201ENSMUST00000121159 501 ntBASIC14.29□□□□□ -0.12
VimP20152 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.29□□□□□ -0.12
VimP20152 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.29□□□□□ -0.12
VimP20152 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.29□□□□□ -0.12
VimP20152 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.29□□□□□ -0.12
VimP20152 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.29□□□□□ -0.12
VimP20152 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
VimP20152 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VimP20152 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
VimP20152 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.28□□□□□ -0.12
VimP20152 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VimP20152 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.28□□□□□ -0.12
VimP20152 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VimP20152 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.28□□□□□ -0.12
VimP20152 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
VimP20152 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.28□□□□□ -0.12
VimP20152 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VimP20152 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.28□□□□□ -0.12
VimP20152 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VimP20152 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VimP20152 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.28□□□□□ -0.12
VimP20152 Gm6296-201ENSMUST00000222599 943 ntBASIC14.28□□□□□ -0.12
VimP20152 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.28□□□□□ -0.12
VimP20152 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.28□□□□□ -0.12
VimP20152 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VimP20152 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VimP20152 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VimP20152 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.28□□□□□ -0.12
VimP20152 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VimP20152 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VimP20152 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VimP20152 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
VimP20152 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VimP20152 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.27□□□□□ -0.12
VimP20152 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VimP20152 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VimP20152 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VimP20152 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VimP20152 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VimP20152 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.27□□□□□ -0.13
VimP20152 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.27□□□□□ -0.13
VimP20152 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VimP20152 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.27□□□□□ -0.13
VimP20152 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VimP20152 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.27□□□□□ -0.13
VimP20152 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.27□□□□□ -0.13
VimP20152 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VimP20152 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VimP20152 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms