Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ly6c1P0CW02 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ly6c1P0CW02 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ly6c1P0CW02 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ly6c1P0CW02 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ly6c1P0CW02 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Ly6c1P0CW02 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ly6c1P0CW02 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Gm14719-201ENSMUST00000121891 340 ntBASIC11.79□□□□□ -0.52
Ly6c1P0CW02 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.79□□□□□ -0.52
Ly6c1P0CW02 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ly6c1P0CW02 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ly6c1P0CW02 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms