Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Sod1P08228 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sod1P08228 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.13□□□□□ -0.31
Sod1P08228 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.13□□□□□ -0.31
Sod1P08228 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sod1P08228 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Gm10156-201ENSMUST00000122364 462 ntBASIC13.12□□□□□ -0.31
Sod1P08228 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Gm27514-201ENSMUST00000183692 110 ntBASIC13.12□□□□□ -0.31
Sod1P08228 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.12□□□□□ -0.31
Sod1P08228 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.12□□□□□ -0.31
Sod1P08228 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.12□□□□□ -0.31
Sod1P08228 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sod1P08228 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sod1P08228 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.11□□□□□ -0.31
Sod1P08228 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.11□□□□□ -0.31
Sod1P08228 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sod1P08228 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.11□□□□□ -0.31
Sod1P08228 Gm8213-201ENSMUST00000118191 441 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.11□□□□□ -0.31
Sod1P08228 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.11□□□□□ -0.31
Sod1P08228 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.11□□□□□ -0.31
Sod1P08228 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Sod1P08228 Gm43818-201ENSMUST00000200605 466 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Sod1P08228 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.11□□□□□ -0.31
Sod1P08228 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sod1P08228 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.11□□□□□ -0.31
Sod1P08228 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.11□□□□□ -0.31
Sod1P08228 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sod1P08228 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.1□□□□□ -0.31
Sod1P08228 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sod1P08228 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms