Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.12■□□□□ 0.33
Cops6O88545 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.12■□□□□ 0.33
Cops6O88545 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.12■□□□□ 0.33
Cops6O88545 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cops6O88545 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cops6O88545 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.12■□□□□ 0.33
Cops6O88545 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.11■□□□□ 0.33
Cops6O88545 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.11■□□□□ 0.33
Cops6O88545 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cops6O88545 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Mir698-201ENSMUST00000102164 109 ntBASIC17.11■□□□□ 0.33
Cops6O88545 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.11■□□□□ 0.33
Cops6O88545 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.11■□□□□ 0.33
Cops6O88545 Gm7287-201ENSMUST00000205267 602 ntBASIC17.11■□□□□ 0.33
Cops6O88545 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.11■□□□□ 0.33
Cops6O88545 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.11■□□□□ 0.33
Cops6O88545 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.11■□□□□ 0.33
Cops6O88545 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cops6O88545 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cops6O88545 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.1■□□□□ 0.33
Cops6O88545 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cops6O88545 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cops6O88545 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.1■□□□□ 0.33
Cops6O88545 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cops6O88545 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cops6O88545 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.1■□□□□ 0.33
Cops6O88545 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.1■□□□□ 0.33
Cops6O88545 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.1■□□□□ 0.33
Cops6O88545 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.1■□□□□ 0.33
Cops6O88545 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cops6O88545 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cops6O88545 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cops6O88545 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.09■□□□□ 0.33
Cops6O88545 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.09■□□□□ 0.33
Cops6O88545 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cops6O88545 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms