Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vti1bO88384 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vti1bO88384 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Vti1bO88384 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vti1bO88384 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.44□□□□□ -0.26
Vti1bO88384 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Gm13464-201ENSMUST00000119418 935 ntBASIC13.44□□□□□ -0.26
Vti1bO88384 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Vti1bO88384 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vti1bO88384 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Vti1bO88384 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vti1bO88384 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
Vti1bO88384 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vti1bO88384 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.44□□□□□ -0.26
Vti1bO88384 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vti1bO88384 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.44□□□□□ -0.26
Vti1bO88384 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.43□□□□□ -0.26
Vti1bO88384 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Gm2213-201ENSMUST00000197485 688 ntBASIC13.43□□□□□ -0.26
Vti1bO88384 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.43□□□□□ -0.26
Vti1bO88384 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.43□□□□□ -0.26
Vti1bO88384 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vti1bO88384 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Vti1bO88384 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.43□□□□□ -0.26
Vti1bO88384 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Vti1bO88384 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.42□□□□□ -0.26
Vti1bO88384 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vti1bO88384 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.42□□□□□ -0.26
Vti1bO88384 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.42□□□□□ -0.26
Vti1bO88384 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.42□□□□□ -0.26
Vti1bO88384 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1bO88384 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vti1bO88384 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.42□□□□□ -0.26
Vti1bO88384 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms