Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf13O54965 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rnf13O54965 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf13O54965 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf13O54965 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf13O54965 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf13O54965 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf13O54965 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf13O54965 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rnf13O54965 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.77□□□□□ -0.37
Rnf13O54965 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Rnf13O54965 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.77□□□□□ -0.37
Rnf13O54965 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Rnf13O54965 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Rnf13O54965 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rnf13O54965 Gm5177-201ENSMUST00000183092 997 ntBASIC12.77□□□□□ -0.37
Rnf13O54965 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.77□□□□□ -0.37
Rnf13O54965 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.77□□□□□ -0.37
Rnf13O54965 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.77□□□□□ -0.37
Rnf13O54965 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rnf13O54965 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rnf13O54965 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rnf13O54965 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rnf13O54965 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Rnf13O54965 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rnf13O54965 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rnf13O54965 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Gm12350-201ENSMUST00000121208 462 ntBASIC12.76□□□□□ -0.37
Rnf13O54965 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Gm27301-201ENSMUST00000184012 127 ntBASIC12.76□□□□□ -0.37
Rnf13O54965 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rnf13O54965 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.76□□□□□ -0.37
Rnf13O54965 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.76□□□□□ -0.37
Rnf13O54965 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf13O54965 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf13O54965 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rnf13O54965 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf13O54965 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf13O54965 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf13O54965 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf13O54965 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf13O54965 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.75□□□□□ -0.37
Rnf13O54965 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.75□□□□□ -0.37
Rnf13O54965 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf13O54965 Gm15483-201ENSMUST00000120338 456 ntBASIC12.75□□□□□ -0.37
Rnf13O54965 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf13O54965 Gm2651-201ENSMUST00000203560 838 ntBASIC12.75□□□□□ -0.37
Rnf13O54965 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rnf13O54965 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf13O54965 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf13O54965 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rnf13O54965 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms