Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Gm15371-201ENSMUST00000117057 784 ntBASIC16.87■□□□□ 0.29
NpcdF8VQB8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Gm27501-201ENSMUST00000183599 107 ntBASIC16.87■□□□□ 0.29
NpcdF8VQB8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Gm37714-201ENSMUST00000194742 342 ntBASIC16.87■□□□□ 0.29
NpcdF8VQB8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.87■□□□□ 0.29
NpcdF8VQB8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.87■□□□□ 0.29
NpcdF8VQB8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NpcdF8VQB8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.86■□□□□ 0.29
NpcdF8VQB8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gm12882-201ENSMUST00000121696 517 ntBASIC16.86■□□□□ 0.29
NpcdF8VQB8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gm44364-201ENSMUST00000198368 141 ntBASIC16.86■□□□□ 0.29
NpcdF8VQB8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NpcdF8VQB8 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.85■□□□□ 0.29
NpcdF8VQB8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Gm15957-201ENSMUST00000118893 974 ntBASIC16.85■□□□□ 0.29
NpcdF8VQB8 Gm15808-201ENSMUST00000119046 604 ntBASIC16.85■□□□□ 0.29
NpcdF8VQB8 Gm22331-201ENSMUST00000158066 136 ntBASIC16.85■□□□□ 0.29
NpcdF8VQB8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Gm38002-201ENSMUST00000193255 180 ntBASIC16.85■□□□□ 0.29
NpcdF8VQB8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NpcdF8VQB8 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms