Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc188F6WEU2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Gm23200-201ENSMUST00000104379 132 ntBASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Prob1-201ENSMUST00000097619 3021 ntBASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc188F6WEU2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Gm14130-201ENSMUST00000118417 987 ntBASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Gm14726-201ENSMUST00000120623 896 ntBASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Gm16479-201ENSMUST00000121706 932 ntBASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Gm16397-201ENSMUST00000122201 494 ntBASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc188F6WEU2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Gm13611-201ENSMUST00000118269 318 ntBASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Gm4607-201ENSMUST00000206649 577 ntBASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc188F6WEU2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms