Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Gm28631-201ENSMUST00000190740 334 ntBASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Gm33320-201ENSMUST00000192232 530 ntBASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh17E9PXF0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh17E9PXF0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh17E9PXF0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms