Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Gm1401-201ENSMUST00000122048 772 ntBASIC10.83□□□□□ -0.68
PdfS4R2K0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.83□□□□□ -0.68
PdfS4R2K0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.83□□□□□ -0.68
PdfS4R2K0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.83□□□□□ -0.68
PdfS4R2K0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
PdfS4R2K0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
PdfS4R2K0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
PdfS4R2K0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.82□□□□□ -0.68
PdfS4R2K0 Gm15358-201ENSMUST00000119249 520 ntBASIC10.82□□□□□ -0.68
PdfS4R2K0 Gm15173-201ENSMUST00000122049 433 ntBASIC10.82□□□□□ -0.68
PdfS4R2K0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.82□□□□□ -0.68
PdfS4R2K0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.82□□□□□ -0.68
PdfS4R2K0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
PdfS4R2K0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
PdfS4R2K0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.81□□□□□ -0.68
PdfS4R2K0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
PdfS4R2K0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
PdfS4R2K0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.81□□□□□ -0.68
PdfS4R2K0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.81□□□□□ -0.68
PdfS4R2K0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
PdfS4R2K0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms