Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Gm20445-201ENSMUST00000061905 565 ntBASIC13.53□□□□□ -0.24
Ccdc166S4R181 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Gm25857-201ENSMUST00000082788 129 ntBASIC13.53□□□□□ -0.24
Ccdc166S4R181 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.53□□□□□ -0.24
Ccdc166S4R181 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc166S4R181 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc166S4R181 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Gm6912-201ENSMUST00000117218 544 ntBASIC13.52□□□□□ -0.25
Ccdc166S4R181 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.52□□□□□ -0.25
Ccdc166S4R181 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Gm8515-201ENSMUST00000194852 576 ntBASIC13.52□□□□□ -0.25
Ccdc166S4R181 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.52□□□□□ -0.25
Ccdc166S4R181 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.52□□□□□ -0.25
Ccdc166S4R181 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc166S4R181 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gm15460-201ENSMUST00000118147 391 ntBASIC13.51□□□□□ -0.25
Ccdc166S4R181 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gm23984-201ENSMUST00000157139 203 ntBASIC13.51□□□□□ -0.25
Ccdc166S4R181 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.51□□□□□ -0.25
Ccdc166S4R181 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gm45384-201ENSMUST00000210451 277 ntBASIC13.51□□□□□ -0.25
Ccdc166S4R181 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.51□□□□□ -0.25
Ccdc166S4R181 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.51□□□□□ -0.25
Ccdc166S4R181 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc166S4R181 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms