Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hdac6Q9Z2V5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac6Q9Z2V5 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Gm14723-201ENSMUST00000118686 215 ntBASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hdac6Q9Z2V5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Gm12203-201ENSMUST00000118235 598 ntBASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Gm12209-201ENSMUST00000120089 596 ntBASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Mir8109-201ENSMUST00000184375 117 ntBASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.52■□□□□ 0.4
Hdac6Q9Z2V5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac6Q9Z2V5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac6Q9Z2V5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac6Q9Z2V5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Hdac6Q9Z2V5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms