Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mrpl40Q9Z2Q5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.15□□□□□ -0.15
Mrpl40Q9Z2Q5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Mrpl40Q9Z2Q5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Mrpl40Q9Z2Q5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Gm25144-201ENSMUST00000179561 110 ntBASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Gm25352-201ENSMUST00000179815 110 ntBASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Gm27306-201ENSMUST00000183970 107 ntBASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Gm28630-201ENSMUST00000187806 498 ntBASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Mrpl40Q9Z2Q5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.13□□□□□ -0.15
Mrpl40Q9Z2Q5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mrpl40Q9Z2Q5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms