Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Gm25925-201ENSMUST00000158314 306 ntBASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Gm24158-201ENSMUST00000175263 71 ntBASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim3Q9R1R2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Gm5479-201ENSMUST00000160578 435 ntBASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Gm25948-201ENSMUST00000175334 112 ntBASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Gm7774-201ENSMUST00000200064 533 ntBASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim3Q9R1R2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim3Q9R1R2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms