Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1cQ9ES64 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Ush1cQ9ES64 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1cQ9ES64 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1cQ9ES64 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1cQ9ES64 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.17■□□□□ 0.18
Ush1cQ9ES64 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1cQ9ES64 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ush1cQ9ES64 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Gm44414-201ENSMUST00000203660 2109 ntBASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ush1cQ9ES64 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Gm44241-201ENSMUST00000203230 1662 ntBASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Gm7862-201ENSMUST00000121461 292 ntBASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.15■□□□□ 0.18
Ush1cQ9ES64 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Gm18733-201ENSMUST00000173950 856 ntBASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ush1cQ9ES64 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms